STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S0F389_CHOCRIsocitrate dehydrogenase [NAD] subunit, mitochondrial. (367 aa)    
Predicted Functional Partners:
R7QSI5_CHOCR
Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family.
  
 0.985
R7QHY2_CHOCR
2-oxoglutarate dehydrogenase, E1 component.
  
 0.977
R7QTF1_CHOCR
Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family.
  
0.962
R7QD35_CHOCR
3-isopropylmalate dehydratase.
 
 0.957
ilvH
Acetolactate synthase small subunit.
  
 0.945
R7QKD3_CHOCR
3-isopropylmalate dehydratase small subunit.
  
 0.910
R7QV44_CHOCR
Isocitrate dehydrogenase [NAD] subunit, mitochondrial.
  
  
 
0.904
R7QGG3_CHOCR
Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 
 0.895
R7QEL9_CHOCR
Uncharacterized protein.
  
 
 0.887
R7QIR0_CHOCR
Dihydroxy-acid dehydratase.
  
  
 0.875
Your Current Organism:
Chondrus crispus
NCBI taxonomy Id: 2769
Other names: C. crispus, Irish moss, carageen, carrageen, carragheen
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