node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PEPE_1258 | PEPE_1260 | PEPE_1258 | PEPE_1260 | Thiol-disulfide isomerase and thioredoxin; Belongs to the thioredoxin family. | Hypothetical protein; Belongs to the UPF0473 family. | 0.516 |
PEPE_1258 | PEPE_1261 | PEPE_1258 | PEPE_1261 | Thiol-disulfide isomerase and thioredoxin; Belongs to the thioredoxin family. | RNase H-like ribonuclease; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family. | 0.509 |
PEPE_1258 | PEPE_1262 | PEPE_1258 | PEPE_1262 | Thiol-disulfide isomerase and thioredoxin; Belongs to the thioredoxin family. | Hypothetical protein; Belongs to the UPF0297 family. | 0.505 |
PEPE_1258 | mutS2 | PEPE_1258 | PEPE_1259 | Thiol-disulfide isomerase and thioredoxin; Belongs to the thioredoxin family. | MutS family ATPase; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily. | 0.671 |
PEPE_1260 | PEPE_1258 | PEPE_1260 | PEPE_1258 | Hypothetical protein; Belongs to the UPF0473 family. | Thiol-disulfide isomerase and thioredoxin; Belongs to the thioredoxin family. | 0.516 |
PEPE_1260 | PEPE_1261 | PEPE_1260 | PEPE_1261 | Hypothetical protein; Belongs to the UPF0473 family. | RNase H-like ribonuclease; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family. | 0.928 |
PEPE_1260 | PEPE_1262 | PEPE_1260 | PEPE_1262 | Hypothetical protein; Belongs to the UPF0473 family. | Hypothetical protein; Belongs to the UPF0297 family. | 0.917 |
PEPE_1260 | alaS | PEPE_1260 | PEPE_1263 | Hypothetical protein; Belongs to the UPF0473 family. | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.663 |
PEPE_1260 | cshB | PEPE_1260 | PEPE_1264 | Hypothetical protein; Belongs to the UPF0473 family. | Superfamily II DNA and RNA helicase; Probable DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures. | 0.427 |
PEPE_1260 | mutS2 | PEPE_1260 | PEPE_1259 | Hypothetical protein; Belongs to the UPF0473 family. | MutS family ATPase; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily. | 0.672 |
PEPE_1261 | PEPE_1258 | PEPE_1261 | PEPE_1258 | RNase H-like ribonuclease; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family. | Thiol-disulfide isomerase and thioredoxin; Belongs to the thioredoxin family. | 0.509 |
PEPE_1261 | PEPE_1260 | PEPE_1261 | PEPE_1260 | RNase H-like ribonuclease; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family. | Hypothetical protein; Belongs to the UPF0473 family. | 0.928 |
PEPE_1261 | PEPE_1262 | PEPE_1261 | PEPE_1262 | RNase H-like ribonuclease; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family. | Hypothetical protein; Belongs to the UPF0297 family. | 0.970 |
PEPE_1261 | PEPE_1498 | PEPE_1261 | PEPE_1498 | RNase H-like ribonuclease; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family. | rRNA methylase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | 0.418 |
PEPE_1261 | alaS | PEPE_1261 | PEPE_1263 | RNase H-like ribonuclease; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family. | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.831 |
PEPE_1261 | cinA | PEPE_1261 | PEPE_1277 | RNase H-like ribonuclease; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family. | Competence/damage-inducible protein cinA; Belongs to the CinA family. | 0.462 |
PEPE_1261 | cshB | PEPE_1261 | PEPE_1264 | RNase H-like ribonuclease; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family. | Superfamily II DNA and RNA helicase; Probable DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures. | 0.454 |
PEPE_1261 | miaA | PEPE_1261 | PEPE_0736 | RNase H-like ribonuclease; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family. | tRNA delta(2)-isopentenylpyrophosphate transferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. | 0.506 |
PEPE_1261 | mutS2 | PEPE_1261 | PEPE_1259 | RNase H-like ribonuclease; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family. | MutS family ATPase; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily. | 0.669 |
PEPE_1261 | ruvB | PEPE_1261 | PEPE_1271 | RNase H-like ribonuclease; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family. | Holliday junction DNA helicase subunit RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. | 0.438 |