STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NBR_LOCUS306Mername-AA194 putative peptidase (inferred by orthology to a S. mansoni protein). (139 aa)    
Predicted Functional Partners:
NBR_LOCUS16181
Abhydrolase_2 domain-containing protein.
     
 0.569
NBR_LOCUS16182
Ribosomal_L7Ae domain-containing protein.
     
 0.569
NBR_LOCUS22084
Ribosomal_L7Ae domain-containing protein.
     
 0.569
NBR_LOCUS8347
ATP-dependent 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. ATP-dependent PFK group I subfamily. Eukaryotic two domain clade 'E' sub-subfamily.
  
 
  0.520
NBR_LOCUS19878
Non-specific lipid-transfer protein (inferred by orthology to a human protein); Belongs to the thiolase-like superfamily. Thiolase family.
     
 0.512
NBR_LOCUS12211
Probable very-long-chain enoyl-CoA reductase art-1 (inferred by orthology to a C. elegans protein).
     
 0.512
NBR_LOCUS10678
Peroxisomal targeting signal 1 receptor (inferred by orthology to a human protein).
     
 0.494
NBR_LOCUS7746
Probable peroxisomal membrane protein PEX13 (inferred by orthology to a C. elegans protein).
     
 0.489
NBR_LOCUS1137
FYVE-type domain-containing protein.
  
 
 0.460
NBR_LOCUS2970
Uncharacterized protein.
  
 
 0.460
Your Current Organism:
Nippostrongylus brasiliensis
NCBI taxonomy Id: 27835
Other names: N. brasiliensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.