STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NBR_LOCUS439Ubiquitin-like modifier-activating enzyme 6 (inferred by orthology to a human protein); Belongs to the ubiquitin-activating E1 family. (1021 aa)    
Predicted Functional Partners:
NBR_LOCUS18797
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.999
NBR_LOCUS338
Ubiquitin-60S ribosomal protein L40 (inferred by orthology to a C. elegans protein).
    
 0.998
NBR_LOCUS17097
Ubiquitin-40S ribosomal protein S27a (inferred by orthology to a human protein).
   
 0.998
NBR_LOCUS10612
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.997
NBR_LOCUS21452
Ubiquitin-conjugating enzyme E2 2 (inferred by orthology to a C. elegans protein); Belongs to the ubiquitin-conjugating enzyme family.
   
 0.997
NBR_LOCUS5980
Ubiquitin-conjugating enzyme E2 N (inferred by orthology to a D. melanogaster protein); Belongs to the ubiquitin-conjugating enzyme family.
  
 0.997
NBR_LOCUS14358
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.996
NBR_LOCUS7873
Ubiquitin-conjugating enzyme E2 G2 (inferred by orthology to a human protein); Belongs to the ubiquitin-conjugating enzyme family.
    
 0.994
NBR_LOCUS374
Ubiquitin-conjugating enzyme E2 K (inferred by orthology to a human protein); Belongs to the ubiquitin-conjugating enzyme family.
   
 0.990
NBR_LOCUS17696
Ubiquitin-conjugating enzyme E2 K (inferred by orthology to a human protein); Belongs to the ubiquitin-conjugating enzyme family.
   
 0.990
Your Current Organism:
Nippostrongylus brasiliensis
NCBI taxonomy Id: 27835
Other names: N. brasiliensis
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.