STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NBR_LOCUS1404Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family. (584 aa)    
Predicted Functional Partners:
NBR_LOCUS11147
Malate synthase; Belongs to the malate synthase family.
  
 
  0.826
NBR_LOCUS17624
Uncharacterized protein.
    
 0.759
NBR_LOCUS6651
Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family.
  
  
 
0.722
NBR_LOCUS18213
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
    
 0.701
NBR_LOCUS10126
Uncharacterized protein; Belongs to the MAGUK family.
    
 0.695
NBR_LOCUS8173
rRNA-processing protein FCF1 homolog (inferred by orthology to a human protein).
    
  0.688
NBR_LOCUS10112
Nucleolar complex protein 4 homolog (inferred by orthology to a human protein).
    
  0.688
NBR_LOCUS14274
Ribosomal RNA small subunit methyltransferase nep-1 (inferred by orthology to a C. elegans protein).
    
  0.688
NBR_LOCUS7955
GP-PDE domain-containing protein.
    
 0.687
NBR_LOCUS12423
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
    
  0.687
Your Current Organism:
Nippostrongylus brasiliensis
NCBI taxonomy Id: 27835
Other names: N. brasiliensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.