STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NBR_LOCUS2103CaMBD domain-containing protein. (88 aa)    
Predicted Functional Partners:
NBR_LOCUS12360
Calcium-activated potassium channel slo-1 (inferred by orthology to a C. elegans protein).
     
 0.813
NBR_LOCUS6715
Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
   
 
 0.757
NBR_LOCUS991
Potassium voltage-gated channel subfamily KQT member 1 (inferred by orthology to a human protein); Belongs to the potassium channel family.
   
 
 0.753
NBR_LOCUS7357
BTB domain-containing protein; Belongs to the potassium channel family.
   
 
 0.751
NBR_LOCUS17231
Calmodulin (inferred by orthology to a C. elegans protein); Belongs to the calmodulin family.
    
 
 0.684
NBR_LOCUS1695
Uncharacterized protein; Belongs to the calmodulin family.
    
 
 0.684
NBR_LOCUS18055
Uncharacterized protein.
 
     0.636
NBR_LOCUS470
Putative lipoyltransferase 2, mitochondrial; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate. Belongs to the LipB family.
     
 0.607
NBR_LOCUS6635
Inward rectifier potassium channel irk-1 (inferred by orthology to a C. elegans protein).
     
 0.548
NBR_LOCUS6636
Uncharacterized protein.
     
 0.548
Your Current Organism:
Nippostrongylus brasiliensis
NCBI taxonomy Id: 27835
Other names: N. brasiliensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.