STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NBR_LOCUS2816Uncharacterized protein. (117 aa)    
Predicted Functional Partners:
NBR_LOCUS14252
DNA polymerase eta (inferred by orthology to a human protein).
   
 0.986
NBR_LOCUS7058
DNA polymerase (inferred by orthology to a C. elegans protein).
   
 0.970
NBR_LOCUS7059
DNA polymerase (inferred by orthology to a C. elegans protein).
   
 0.970
NBR_LOCUS7801
DNA polymerase kappa (inferred by orthology to a C. elegans protein).
   
 0.945
NBR_LOCUS7804
DNA polymerase kappa (inferred by orthology to a C. elegans protein).
   
 0.945
NBR_LOCUS338
Ubiquitin-60S ribosomal protein L40 (inferred by orthology to a C. elegans protein).
    
 0.937
NBR_LOCUS17097
Ubiquitin-40S ribosomal protein S27a (inferred by orthology to a human protein).
    
 0.935
NBR_LOCUS18797
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
 0.934
NBR_LOCUS2558
Proliferating cell nuclear antigen (inferred by orthology to a C. elegans protein).
   
 0.899
NBR_LOCUS2660
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.899
Your Current Organism:
Nippostrongylus brasiliensis
NCBI taxonomy Id: 27835
Other names: N. brasiliensis
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