STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NBR_LOCUS4225Protein mesh (inferred by orthology to a D. melanogaster protein). (103 aa)    
Predicted Functional Partners:
NBR_LOCUS1145
Protein mesh (inferred by orthology to a D. melanogaster protein).
 
     0.595
NBR_LOCUS17198
Protein mesh (inferred by orthology to a D. melanogaster protein).
  
     0.479
NBR_LOCUS18797
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
      
 0.426
NBR_LOCUS15408
Sushi domain-containing protein.
 
      0.422
NBR_LOCUS8874
Uncharacterized protein.
  
     0.404
NBR_LOCUS2045
Uncharacterized protein.
  
  
  0.402
Your Current Organism:
Nippostrongylus brasiliensis
NCBI taxonomy Id: 27835
Other names: N. brasiliensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.