STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NBR_LOCUS7827Uncharacterized protein. (561 aa)    
Predicted Functional Partners:
NBR_LOCUS11147
Malate synthase; Belongs to the malate synthase family.
   
 
 0.904
NBR_LOCUS7006
Serine/threonine-protein phosphatase.
    
  0.710
NBR_LOCUS1068
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.
    
 0.704
NBR_LOCUS21159
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.
    
 0.704
NBR_LOCUS7146
Laminin subunit beta-1 (inferred by orthology to a D. melanogaster protein).
    
 0.691
NBR_LOCUS13222
Serine/threonine-protein kinase PLK.
   
 0.690
NBR_LOCUS11604
Inactive serine/threonine-protein kinase PLK5 (inferred by orthology to a human protein).
   
 0.688
NBR_LOCUS11599
ADP-ribosylation factor-like protein 1 (inferred by orthology to a C. elegans protein); Belongs to the small GTPase superfamily. Arf family.
    
  0.687
NBR_LOCUS6686
Barrier-to-autointegration factor 1 (inferred by orthology to a C. elegans protein).
    
 0.683
NBR_LOCUS6718
TOG domain-containing protein.
    
  0.676
Your Current Organism:
Nippostrongylus brasiliensis
NCBI taxonomy Id: 27835
Other names: N. brasiliensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.