STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NBR_LOCUS8660Tyrosine-protein phosphatase domain-containing protein. (341 aa)    
Predicted Functional Partners:
NBR_LOCUS16085
Sex muscle abnormal protein 5 (inferred by orthology to a C. elegans protein).
   
 0.685
NBR_LOCUS10499
Liprin-alpha (inferred by orthology to a C. elegans protein).
    
 0.671
NBR_LOCUS14949
Signal transducer and activator of transcription 1 (inferred by orthology to a C. elegans protein).
    
 0.653
NBR_LOCUS20305
Signal transducer and activator of transcription 1 (inferred by orthology to a C. elegans protein).
    
 0.653
NBR_LOCUS2954
Insulin-like receptor (inferred by orthology to a D. melanogaster protein).
    
  0.630
NBR_LOCUS3233
Insulin-like receptor (inferred by orthology to a D. melanogaster protein).
    
  0.630
NBR_LOCUS3267
Uncharacterized protein.
    
  0.630
NBR_LOCUS4084
Insulin-like receptor (inferred by orthology to a D. melanogaster protein).
    
  0.630
NBR_LOCUS16460
Receptor protein-tyrosine kinase.
    
  0.630
NBR_LOCUS824
Mitogen-activated protein kinase pmk-2 (inferred by orthology to a C. elegans protein).
    
 0.627
Your Current Organism:
Nippostrongylus brasiliensis
NCBI taxonomy Id: 27835
Other names: N. brasiliensis
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