STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NBR_LOCUS10137Uncharacterized protein. (186 aa)    
Predicted Functional Partners:
NBR_LOCUS8974
Nephrocystin-1-like protein (inferred by orthology to a C. elegans protein).
   
 0.970
NBR_LOCUS1230
Uncharacterized protein.
    
 0.942
NBR_LOCUS22721
Serine/threonine-protein kinase Warts (inferred by orthology to a D. melanogaster protein); Belongs to the protein kinase superfamily.
    
 0.784
NBR_LOCUS1682
Uncharacterized protein.
    
 0.740
NBR_LOCUS7068
Formin-like protein CG32138 (inferred by orthology to a D. melanogaster protein).
    
 0.740
NBR_LOCUS7354
Uncharacterized protein.
    
 0.740
NBR_LOCUS11524
Uncharacterized protein.
    
 0.740
NBR_LOCUS12889
Uncharacterized protein.
    
 0.740
NBR_LOCUS16928
Uncharacterized protein.
    
 0.740
NBR_LOCUS18801
Formin-homology and zinc finger domains protein 1 (inferred by orthology to a C. elegans protein).
    
 0.740
Your Current Organism:
Nippostrongylus brasiliensis
NCBI taxonomy Id: 27835
Other names: N. brasiliensis
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