STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NBR_LOCUS12074Ras-associating domain-containing protein. (343 aa)    
Predicted Functional Partners:
NBR_LOCUS15544
Apoptotic enhancer 1 protein (inferred by orthology to a C. elegans protein).
    
 
 0.905
NBR_LOCUS16107
Apoptotic enhancer 1 protein (inferred by orthology to a C. elegans protein).
    
 
 0.905
NBR_LOCUS9350
Serine/threonine-protein phosphatase.
    
 
 0.517
NBR_LOCUS4033
FERM domain-containing protein.
    
 
 0.497
NBR_LOCUS4602
Uncharacterized protein.
    
 
 0.497
NBR_LOCUS19049
Protein expanded (inferred by orthology to a D. melanogaster protein).
    
 
 0.497
NBR_LOCUS22186
FERM domain-containing protein.
    
 
 0.497
NBR_LOCUS14853
SEP domain-containing protein.
      
 0.485
NBR_LOCUS10579
Slo-interacting protein 1 (inferred by orthology to a D. melanogaster protein).
   
  
 0.460
NBR_LOCUS18791
Slo-interacting protein 1 (inferred by orthology to a D. melanogaster protein).
   
  
 0.460
Your Current Organism:
Nippostrongylus brasiliensis
NCBI taxonomy Id: 27835
Other names: N. brasiliensis
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