STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NBR_LOCUS14124Proteasome subunit beta type (inferred by orthology to a C. elegans protein). (325 aa)    
Predicted Functional Partners:
NBR_LOCUS6176
Proteasome subunit beta.
   
 0.999
NBR_LOCUS6606
Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family.
   
 0.999
NBR_LOCUS6865
Proteasome subunit beta type (inferred by orthology to a C. elegans protein).
   
 0.999
NBR_LOCUS8055
PCI domain-containing protein.
   
 0.999
NBR_LOCUS8150
Proteasome subunit beta.
   
 0.999
NBR_LOCUS8365
Probable 26S protease regulatory subunit 4 (inferred by orthology to a C. elegans protein); Belongs to the AAA ATPase family.
   
 0.999
NBR_LOCUS9011
26S protease regulatory subunit 6A (inferred by orthology to a human protein); Belongs to the AAA ATPase family.
  
 0.999
NBR_LOCUS9867
AAA domain-containing protein; Belongs to the AAA ATPase family.
  
 0.999
NBR_LOCUS10206
Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family.
   
 0.999
NBR_LOCUS11517
Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family.
   
 0.999
Your Current Organism:
Nippostrongylus brasiliensis
NCBI taxonomy Id: 27835
Other names: N. brasiliensis
Server load: low (30%) [HD]