STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NBR_LOCUS14982Sphingomyelin synthase-related 2 (inferred by orthology to a C. elegans protein). (275 aa)    
Predicted Functional Partners:
NBR_LOCUS94
FA_desaturase domain-containing protein; Belongs to the fatty acid desaturase type 1 family. DEGS subfamily.
   
 
 0.962
NBR_LOCUS11637
PAP2_C domain-containing protein.
  
  
  0.956
NBR_LOCUS17514
PAP2_C domain-containing protein.
  
  
  0.953
NBR_LOCUS20537
Ceramide glucosyltransferase (inferred by orthology to a human protein).
     
 0.945
NBR_LOCUS12110
Probable ceramide synthase lagr-1 (inferred by orthology to a C. elegans protein).
     
 0.942
NBR_LOCUS13501
Ceramide synthase hyl-1 (inferred by orthology to a C. elegans protein).
     
 0.942
NBR_LOCUS8626
PAP2_C domain-containing protein.
  
  
 
0.937
NBR_LOCUS14139
Sphingomyelin phosphodiesterase 2 (inferred by orthology to a C. elegans protein).
     
 0.937
NBR_LOCUS12092
acidPPc domain-containing protein.
     
 0.931
NBR_LOCUS4509
Uncharacterized protein.
   
 
 0.897
Your Current Organism:
Nippostrongylus brasiliensis
NCBI taxonomy Id: 27835
Other names: N. brasiliensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.