STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NBR_LOCUS15127Glyco_18 domain-containing protein; Belongs to the glycosyl hydrolase 18 family. (277 aa)    
Predicted Functional Partners:
NBR_LOCUS143
Probable endochitinase (inferred by orthology to a C. elegans protein); Belongs to the glycosyl hydrolase 18 family.
  
  
 
0.943
NBR_LOCUS347
Uncharacterized protein; Belongs to the glycosyl hydrolase 18 family.
  
  
 
0.940
NBR_LOCUS710
BcrAD_BadFG domain-containing protein.
     
 0.935
NBR_LOCUS21565
Uncharacterized protein.
   
 0.934
NBR_LOCUS10260
Cytochrome c oxidase subunit VIb (inferred by orthology to a D. melanogaster protein).
   
 0.901
NBR_LOCUS15441
Cytochrome c oxidase subunit VIb (inferred by orthology to a D. melanogaster protein).
   
 0.901
NBR_LOCUS476
Cytochrome c oxidase subunit 5A, mitochondrial (inferred by orthology to a C. elegans protein).
   
 0.896
NBR_LOCUS901
Uncharacterized protein.
     
 0.846
NBR_LOCUS5358
Uncharacterized protein.
     
 0.846
NBR_LOCUS16056
Uncharacterized protein.
     
 0.846
Your Current Organism:
Nippostrongylus brasiliensis
NCBI taxonomy Id: 27835
Other names: N. brasiliensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.