STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NBR_LOCUS189983'-5' exonuclease domain-containing protein. (534 aa)    
Predicted Functional Partners:
NBR_LOCUS8058
Uncharacterized protein.
   
    0.664
NBR_LOCUS8972
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
    0.657
NBR_LOCUS21590
U3 small nucleolar RNA-associated protein 15 homolog (inferred by orthology to a human protein).
   
    0.654
NBR_LOCUS16415
Structural maintenance of chromosomes protein.
   
    0.648
NBR_LOCUS15086
Protein NipSnap (inferred by orthology to a D. melanogaster protein).
   
    0.535
NBR_LOCUS21306
Uncharacterized protein.
   
    0.535
NBR_LOCUS17624
Uncharacterized protein.
   
    0.524
NBR_LOCUS3528
Uncharacterized protein.
   
    0.523
NBR_LOCUS21568
Uncharacterized protein.
   
    0.523
NBR_LOCUS11716
Uncharacterized protein.
   
    0.523
Your Current Organism:
Nippostrongylus brasiliensis
NCBI taxonomy Id: 27835
Other names: N. brasiliensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.