STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NBR_LOCUS20257Ion_trans_2 domain-containing protein. (122 aa)    
Predicted Functional Partners:
NBR_LOCUS3531
Uncharacterized protein.
   
 
 0.684
NBR_LOCUS991
Potassium voltage-gated channel subfamily KQT member 1 (inferred by orthology to a human protein); Belongs to the potassium channel family.
     
 0.623
NBR_LOCUS15501
Uncharacterized protein; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.
   
 
 0.606
NBR_LOCUS15502
Uncharacterized protein.
   
 
 0.606
NBR_LOCUS7064
Uncharacterized protein; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.
     
0.605
NBR_LOCUS8361
Uncharacterized protein; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.
     
 0.605
NBR_LOCUS19995
Ion_trans_2 domain-containing protein.
     
 0.603
NBR_LOCUS12418
Ion_trans_2 domain-containing protein.
 
      0.562
NBR_LOCUS717
Uncharacterized protein; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.
     
0.465
NBR_LOCUS1341
TWiK family of potassium channels protein 7 (inferred by orthology to a C. elegans protein); Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.
     
 0.465
Your Current Organism:
Nippostrongylus brasiliensis
NCBI taxonomy Id: 27835
Other names: N. brasiliensis
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