STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NBR_LOCUS11992Tetraspanin. (229 aa)    
Predicted Functional Partners:
NBR_LOCUS140
Integrin beta; Belongs to the integrin beta chain family.
    
 0.751
NBR_LOCUS6645
Uncharacterized integrin beta-like protein (inferred by orthology to a C. elegans protein).
    
 0.751
NBR_LOCUS3928
Integrin alpha-PS2 (inferred by orthology to a D. melanogaster protein).
    
 0.710
NBR_LOCUS14167
Integrin alpha ina-1 (inferred by orthology to a C. elegans protein); Belongs to the integrin alpha chain family.
    
 0.710
NBR_LOCUS18326
Integrin alpha ina-1 (inferred by orthology to a C. elegans protein); Belongs to the integrin alpha chain family.
    
 0.710
NBR_LOCUS20863
Uncharacterized protein.
    
 0.710
NBR_LOCUS16673
Integrin alpha pat-2 (inferred by orthology to a C. elegans protein).
    
 0.710
NBR_LOCUS17878
Integrin alpha pat-2 (inferred by orthology to a C. elegans protein); Belongs to the integrin alpha chain family.
    
 0.710
NBR_LOCUS990
Uncharacterized protein.
    
 0.710
NBR_LOCUS10072
Tetraspanin.
  
 
0.709
Your Current Organism:
Nippostrongylus brasiliensis
NCBI taxonomy Id: 27835
Other names: N. brasiliensis
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.