STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4Z1JHS4Uncharacterized protein. (175 aa)    
Predicted Functional Partners:
A0A4Z1JGP1
WD_REPEATS_REGION domain-containing protein.
   
  0.535
A0A4Z1K4L8
Ipi1_N domain-containing protein.
    
  0.519
A0A4Z1JQ27
Uncharacterized protein; Belongs to the universal ribosomal protein uS11 family.
    
  0.455
NOP7
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
  0.454
A0A4Z1JRT9
CP-type G domain-containing protein.
   
  0.426
A0A4Z1K159
Uncharacterized protein.
    
  0.420
A0A4Z1KEP1
Ribosomal_L2_C domain-containing protein.
    
  0.417
A0A4Z1J3R6
Ribosomal_L7Ae domain-containing protein.
    
  0.404
A0A4Z1J4U3
Uncharacterized protein.
    
  0.403
A0A4Z1JN27
Uncharacterized protein; Belongs to the calmodulin family.
    
  0.403
Your Current Organism:
Botrytis elliptica
NCBI taxonomy Id: 278938
Other names: B. elliptica
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