A0A4Z1JL92 protein (Botrytis elliptica) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A4Z1JL92

Beta-lactamase domain-containing protein. (478 aa)

Predicted Functional Partners:

A0A4Z1JCY3

0.808

A0A4Z1K2X5

0.804

A0A4Z1JH48

0.607

A0A4Z1JPW5

0.564

A0A4Z1JLL1

0.556

A0A4Z1JP38

0.556

A0A4Z1JX84

0.556

A0A4Z1JXK3

0.556

A0A4Z1K089

0.556

A0A4Z1KBE4

0.556

Your Current Organism:

Botrytis elliptica

NCBI taxonomy Id: 278938
Other names: B. elliptica

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A4Z1JCY3	A0A4Z1JL92	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	Beta-lactamase domain-containing protein.	0.808
A0A4Z1JCY3	A0A4Z1K2X5	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	Uncharacterized protein.	0.446
A0A4Z1JH48	A0A4Z1JL92	DRIM domain-containing protein.	Beta-lactamase domain-containing protein.	0.607
A0A4Z1JH48	A0A4Z1JLL1	DRIM domain-containing protein.	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.	0.998
A0A4Z1JH48	A0A4Z1JP38	DRIM domain-containing protein.	PINc domain-containing protein.	0.999
A0A4Z1JH48	A0A4Z1JPW5	DRIM domain-containing protein.	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.	0.998
A0A4Z1JH48	A0A4Z1JX84	DRIM domain-containing protein.	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.	0.999
A0A4Z1JH48	A0A4Z1JXK3	DRIM domain-containing protein.	Uncharacterized protein.	0.998
A0A4Z1JH48	A0A4Z1K089	DRIM domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.999
A0A4Z1JH48	A0A4Z1KBE4	DRIM domain-containing protein.	CBF domain-containing protein.	0.999
A0A4Z1JL92	A0A4Z1JCY3	Beta-lactamase domain-containing protein.	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	0.808
A0A4Z1JL92	A0A4Z1JH48	Beta-lactamase domain-containing protein.	DRIM domain-containing protein.	0.607
A0A4Z1JL92	A0A4Z1JLL1	Beta-lactamase domain-containing protein.	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.	0.556
A0A4Z1JL92	A0A4Z1JP38	Beta-lactamase domain-containing protein.	PINc domain-containing protein.	0.556
A0A4Z1JL92	A0A4Z1JPW5	Beta-lactamase domain-containing protein.	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.	0.564
A0A4Z1JL92	A0A4Z1JX84	Beta-lactamase domain-containing protein.	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.	0.556
A0A4Z1JL92	A0A4Z1JXK3	Beta-lactamase domain-containing protein.	Uncharacterized protein.	0.556
A0A4Z1JL92	A0A4Z1K089	Beta-lactamase domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.556
A0A4Z1JL92	A0A4Z1K2X5	Beta-lactamase domain-containing protein.	Uncharacterized protein.	0.804
A0A4Z1JL92	A0A4Z1KBE4	Beta-lactamase domain-containing protein.	CBF domain-containing protein.	0.556