STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BL00257ABC transport system ATP-binding protein. (254 aa)    
Predicted Functional Partners:
BL00256
ABC transport system permease protein.
 
 
 0.974
BL00258
Two-component sensor histidine kinase. potential cognate response regulator is YxdJ.
 
 
 
 0.958
yknZ
Putative ABC transporter permease.
   0.950
bceB
Bacitracine efflux ABC transport system permease.
 
 
 0.914
yxdL
ABC transporter.
  
  
 
0.901
yxdK
Histidine kinase, homodimeric.
 
 
 
 0.898
yxdM
GTP-binding signal recognition particle (SRP54) G-domain.
 
 
 0.883
yxdJ
Two-component response regulator. potential cognate sensor kinase is YxdK.
 
     0.822
bceS
Histidine kinase, homodimeric.
 
 
 
 0.793
ytrF
Possible acetoin transport system substrate binding protein YtrF.
 
 
 0.738
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.