STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BL01747Sugar ABC transporter (ATP-binding protein); BL01747 similar to rbsA from Bacillus subtilis. (522 aa)    
Predicted Functional Partners:
rbsC
Ribose ABC transporter (permease); Belongs to the binding-protein-dependent transport system permease family.
 
 0.989
rbsB
Ribose ABC transporter (ribose-binding protein).
 
 
 0.978
BL01743
Ribose ABC transporter (ribose-binding protein); BL01743 similar to rbsB from Bacillus subtilis.
 
 
 0.976
BL01746
Ribose ABC transporter (ribose-binding protein); BL01746 similar to rbsB from Bacillus subtilis.
  
 0.968
BL01748
Sugar ABC transporter (permease); BL01748 similar to rbsC from Bacillus subtilis; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.960
rbsD
Ribose ABC transporter (membrane protein); Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose.
 
  
 0.934
rbsK
Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
 
  
 0.909
BL00167
Putative D-xylose-binding protein.
  
 0.815
metS
methionyl-tRNA synthetase MetS; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 2B subfamily.
    
   0.786
fruR-2
Putative transcriptional regulator.
  
    0.786
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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