STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BL01747Sugar ABC transporter (ATP-binding protein); BL01747 similar to rbsA from Bacillus subtilis. (522 aa)    
Predicted Functional Partners:
rbsC
Ribose ABC transporter (permease); Belongs to the binding-protein-dependent transport system permease family.
 0.984
BL01743
Ribose ABC transporter (ribose-binding protein); BL01743 similar to rbsB from Bacillus subtilis.
 0.977
BL01748
Sugar ABC transporter (permease); BL01748 similar to rbsC from Bacillus subtilis; Belongs to the binding-protein-dependent transport system permease family.
 
 0.977
BL01746
Ribose ABC transporter (ribose-binding protein); BL01746 similar to rbsB from Bacillus subtilis.
 
 0.976
rbsB
Ribose ABC transporter (ribose-binding protein).
 
 0.966
BL00167
Putative D-xylose-binding protein.
 
 0.859
rbsD
Ribose ABC transporter (membrane protein); Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose.
 
  
 0.856
rbsK
Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
 
  
 0.831
fruR-2
Putative transcriptional regulator.
  
 
  0.713
rbsR
Transcriptional regulator (LacI family).
  
 
  0.713
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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