Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BL01346 | speB | BL01346 | BL03921 | Hypothetical protein. | Agmatinase; Belongs to the arginase family. | 0.560 |
argS | speB | BL03923 | BL03921 | arginyl-tRNA synthetase. | Agmatinase; Belongs to the arginase family. | 0.547 |
argS | speE | BL03923 | BL03920 | arginyl-tRNA synthetase. | Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine. | 0.569 |
argS | ywiB | BL03923 | BL03922 | arginyl-tRNA synthetase. | Conserved protein YwiB. | 0.942 |
gltA | speB | BL01971 | BL03921 | Glutamate synthase (large subunit). | Agmatinase; Belongs to the arginase family. | 0.757 |
gltA | yhcX | BL01971 | BL03168 | Glutamate synthase (large subunit). | Conserved hypothetical protein YhcX. | 0.799 |
speA | speB | BL01634 | BL03921 | Arginine decarboxylase. | Agmatinase; Belongs to the arginase family. | 0.848 |
speA | speD | BL01634 | BL00389 | Arginine decarboxylase. | S-adenosylmethionine decarboxylase; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine; Belongs to the prokaryotic AdoMetDC family. Type 1 subfamily. | 0.457 |
speA | speE | BL01634 | BL03920 | Arginine decarboxylase. | Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine. | 0.874 |
speA | yaaO | BL01634 | BL02508 | Arginine decarboxylase. | Putative Orn/Lys/Arg decarboxylase, C-terminal YaaO; Probable lysine decarboxylase. | 0.613 |
speB | BL01346 | BL03921 | BL01346 | Agmatinase; Belongs to the arginase family. | Hypothetical protein. | 0.560 |
speB | argS | BL03921 | BL03923 | Agmatinase; Belongs to the arginase family. | arginyl-tRNA synthetase. | 0.547 |
speB | gltA | BL03921 | BL01971 | Agmatinase; Belongs to the arginase family. | Glutamate synthase (large subunit). | 0.757 |
speB | speA | BL03921 | BL01634 | Agmatinase; Belongs to the arginase family. | Arginine decarboxylase. | 0.848 |
speB | speD | BL03921 | BL00389 | Agmatinase; Belongs to the arginase family. | S-adenosylmethionine decarboxylase; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine; Belongs to the prokaryotic AdoMetDC family. Type 1 subfamily. | 0.807 |
speB | speE | BL03921 | BL03920 | Agmatinase; Belongs to the arginase family. | Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine. | 0.987 |
speB | yaaO | BL03921 | BL02508 | Agmatinase; Belongs to the arginase family. | Putative Orn/Lys/Arg decarboxylase, C-terminal YaaO; Probable lysine decarboxylase. | 0.682 |
speB | yhcX | BL03921 | BL03168 | Agmatinase; Belongs to the arginase family. | Conserved hypothetical protein YhcX. | 0.819 |
speB | yqhQ | BL03921 | BL01512 | Agmatinase; Belongs to the arginase family. | Conserved membrane protein YqhQ. | 0.560 |
speB | ywiB | BL03921 | BL03922 | Agmatinase; Belongs to the arginase family. | Conserved protein YwiB. | 0.541 |
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