Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BL02023 | BL05056 | BL02023 | BL05056 | Penicillin-binding protein. | Cell-division protein; Belongs to the SEDS family. | 0.617 |
BL02023 | cwlC | BL02023 | BL00686 | Penicillin-binding protein. | N-acetylmuramoyl-L-alanine amidase. | 0.562 |
BL02023 | ftsW | BL02023 | BL02975 | Penicillin-binding protein. | Cell-division protein; Belongs to the SEDS family. | 0.746 |
BL02023 | spoVE | BL02023 | BL02242 | Penicillin-binding protein. | SpoVE; Belongs to the SEDS family. | 0.747 |
BL02023 | ywhE | BL02023 | BL03962 | Penicillin-binding protein. | Penicillin-binding protein, Glycosyl Transferase Family 51. | 0.662 |
BL05056 | BL02023 | BL05056 | BL02023 | Cell-division protein; Belongs to the SEDS family. | Penicillin-binding protein. | 0.617 |
BL05056 | cwlC | BL05056 | BL00686 | Cell-division protein; Belongs to the SEDS family. | N-acetylmuramoyl-L-alanine amidase. | 0.535 |
BL05056 | pbpA | BL05056 | BL03709 | Cell-division protein; Belongs to the SEDS family. | Penicillin-binding protein 2A. | 0.719 |
BL05056 | spoVD | BL05056 | BL02237 | Cell-division protein; Belongs to the SEDS family. | Penicillin-binding protein. | 0.878 |
BL05056 | ywhE | BL05056 | BL03962 | Cell-division protein; Belongs to the SEDS family. | Penicillin-binding protein, Glycosyl Transferase Family 51. | 0.696 |
cwlC | BL02023 | BL00686 | BL02023 | N-acetylmuramoyl-L-alanine amidase. | Penicillin-binding protein. | 0.562 |
cwlC | BL05056 | BL00686 | BL05056 | N-acetylmuramoyl-L-alanine amidase. | Cell-division protein; Belongs to the SEDS family. | 0.535 |
cwlC | ftsW | BL00686 | BL02975 | N-acetylmuramoyl-L-alanine amidase. | Cell-division protein; Belongs to the SEDS family. | 0.535 |
cwlC | pbpA | BL00686 | BL03709 | N-acetylmuramoyl-L-alanine amidase. | Penicillin-binding protein 2A. | 0.562 |
cwlC | spoVD | BL00686 | BL02237 | N-acetylmuramoyl-L-alanine amidase. | Penicillin-binding protein. | 0.628 |
cwlC | spoVE | BL00686 | BL02242 | N-acetylmuramoyl-L-alanine amidase. | SpoVE; Belongs to the SEDS family. | 0.535 |
cwlC | ywhE | BL00686 | BL03962 | N-acetylmuramoyl-L-alanine amidase. | Penicillin-binding protein, Glycosyl Transferase Family 51. | 0.828 |
divIVA | ywhE | BL02266 | BL03962 | Cell-division initiation protein. | Penicillin-binding protein, Glycosyl Transferase Family 51. | 0.689 |
ftsW | BL02023 | BL02975 | BL02023 | Cell-division protein; Belongs to the SEDS family. | Penicillin-binding protein. | 0.746 |
ftsW | cwlC | BL02975 | BL00686 | Cell-division protein; Belongs to the SEDS family. | N-acetylmuramoyl-L-alanine amidase. | 0.535 |
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