STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ywhEPenicillin-binding protein, Glycosyl Transferase Family 51. (691 aa)    
Predicted Functional Partners:
spoVD
Penicillin-binding protein.
  
 
 0.886
cwlC
N-acetylmuramoyl-L-alanine amidase.
  
 
 0.828
ypsB
Conserved hypothetical protein YpsB; Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation.
   
 
 0.758
spoVE
SpoVE; Belongs to the SEDS family.
  
 
   0.745
ftsW
Cell-division protein; Belongs to the SEDS family.
  
 
   0.727
BL05056
Cell-division protein; Belongs to the SEDS family.
  
 
   0.696
divIVA
Cell-division initiation protein.
   
 
 0.689
pbpA
Penicillin-binding protein 2A.
  
 
 0.673
spoIIQ
SpoIIQ.
  
    0.667
BL02023
Penicillin-binding protein.
  
 0.662
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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