Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
bglP | pyk | BL00213 | BL00402 | Phosphotransferase system (PTS) beta-glucoside-specific enzyme IIBCA component. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.613 |
bglP | ycgN | BL00213 | BL01710 | Phosphotransferase system (PTS) beta-glucoside-specific enzyme IIBCA component. | Delta-1-pyrroline-5-carboxylate dehydrogenase 2 YcgN; Belongs to the aldehyde dehydrogenase family. RocA subfamily. | 0.772 |
dhbF | gltA | BL04024 | BL01971 | DhbF. | Glutamate synthase (large subunit). | 0.824 |
dhbF | lchAA | BL04024 | BL01726 | DhbF. | Lichenysin synthetase A. | 0.999 |
dhbF | pyk | BL04024 | BL00402 | DhbF. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.498 |
dhbF | rocD | BL04024 | BL01737 | DhbF. | Ornithine aminotransferase; Catalyzes the interconversion of ornithine to glutamate semialdehyde. | 0.421 |
dhbF | serA | BL04024 | BL00647 | DhbF. | Phosphoglycerate dehydrogenase SerA; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.463 |
dhbF | ycgN | BL04024 | BL01710 | DhbF. | Delta-1-pyrroline-5-carboxylate dehydrogenase 2 YcgN; Belongs to the aldehyde dehydrogenase family. RocA subfamily. | 0.822 |
dhbF | yhfW | BL04024 | BL01115 | DhbF. | Putative oxidoreductase YhfW. | 0.899 |
dhbF | yusL | BL04024 | BL02180 | DhbF. | 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase YusL. | 0.895 |
gltA | dhbF | BL01971 | BL04024 | Glutamate synthase (large subunit). | DhbF. | 0.824 |
gltA | lchAA | BL01971 | BL01726 | Glutamate synthase (large subunit). | Lichenysin synthetase A. | 0.764 |
gltA | pyk | BL01971 | BL00402 | Glutamate synthase (large subunit). | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.552 |
gltA | rocD | BL01971 | BL01737 | Glutamate synthase (large subunit). | Ornithine aminotransferase; Catalyzes the interconversion of ornithine to glutamate semialdehyde. | 0.520 |
gltA | serA | BL01971 | BL00647 | Glutamate synthase (large subunit). | Phosphoglycerate dehydrogenase SerA; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.541 |
gltA | ycgM | BL01971 | BL01709 | Glutamate synthase (large subunit). | Putative proline dehydrogenase YcgM. | 0.804 |
gltA | ycgN | BL01971 | BL01710 | Glutamate synthase (large subunit). | Delta-1-pyrroline-5-carboxylate dehydrogenase 2 YcgN; Belongs to the aldehyde dehydrogenase family. RocA subfamily. | 0.851 |
gltA | yhfW | BL01971 | BL01115 | Glutamate synthase (large subunit). | Putative oxidoreductase YhfW. | 0.874 |
gltA | yusL | BL01971 | BL02180 | Glutamate synthase (large subunit). | 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase YusL. | 0.454 |
lchAA | dhbF | BL01726 | BL04024 | Lichenysin synthetase A. | DhbF. | 0.999 |
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