Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
rsbR | rsbS | BL02202 | BL02203 | RbsR. | Antagonist of RsbT. | 0.996 |
rsbR | rsbT | BL02202 | BL02204 | RbsR. | Switch protein/serine-threonine kinase. | 0.998 |
rsbR | rsbU | BL02202 | BL02205 | RbsR. | Serine phosphatase. | 0.992 |
rsbR | rsbV | BL02202 | BL02206 | RbsR. | Anti-anti-sigma factor (antagonist of RsbW); Belongs to the anti-sigma-factor antagonist family. | 0.651 |
rsbR | rsbW | BL02202 | BL02207 | RbsR. | Switch protein/serine kinase and anti-sigma factor (inhibitory sigma-B binding protein); Negative regulator of sigma-B activity. Phosphorylates and inactivates its specific antagonist protein, RsbV. Upon phosphorylation of RsbV, RsbW is released and binds to sigma-B, thereby blocking its ability to form an RNA polymerase holoenzyme (E-sigma-B). | 0.981 |
rsbR | rsbX | BL02202 | BL02209 | RbsR. | Serine phosphatase. | 0.992 |
rsbR | sigB | BL02202 | BL02208 | RbsR. | RNA polymerase sigma-37 factor (sigma-B); Belongs to the sigma-70 factor family. | 0.780 |
rsbS | rsbR | BL02203 | BL02202 | Antagonist of RsbT. | RbsR. | 0.996 |
rsbS | rsbT | BL02203 | BL02204 | Antagonist of RsbT. | Switch protein/serine-threonine kinase. | 0.999 |
rsbS | rsbU | BL02203 | BL02205 | Antagonist of RsbT. | Serine phosphatase. | 0.992 |
rsbS | rsbV | BL02203 | BL02206 | Antagonist of RsbT. | Anti-anti-sigma factor (antagonist of RsbW); Belongs to the anti-sigma-factor antagonist family. | 0.793 |
rsbS | rsbW | BL02203 | BL02207 | Antagonist of RsbT. | Switch protein/serine kinase and anti-sigma factor (inhibitory sigma-B binding protein); Negative regulator of sigma-B activity. Phosphorylates and inactivates its specific antagonist protein, RsbV. Upon phosphorylation of RsbV, RsbW is released and binds to sigma-B, thereby blocking its ability to form an RNA polymerase holoenzyme (E-sigma-B). | 0.983 |
rsbS | rsbX | BL02203 | BL02209 | Antagonist of RsbT. | Serine phosphatase. | 0.993 |
rsbS | sigB | BL02203 | BL02208 | Antagonist of RsbT. | RNA polymerase sigma-37 factor (sigma-B); Belongs to the sigma-70 factor family. | 0.775 |
rsbT | rsbR | BL02204 | BL02202 | Switch protein/serine-threonine kinase. | RbsR. | 0.998 |
rsbT | rsbS | BL02204 | BL02203 | Switch protein/serine-threonine kinase. | Antagonist of RsbT. | 0.999 |
rsbT | rsbU | BL02204 | BL02205 | Switch protein/serine-threonine kinase. | Serine phosphatase. | 0.988 |
rsbT | rsbV | BL02204 | BL02206 | Switch protein/serine-threonine kinase. | Anti-anti-sigma factor (antagonist of RsbW); Belongs to the anti-sigma-factor antagonist family. | 0.930 |
rsbT | rsbW | BL02204 | BL02207 | Switch protein/serine-threonine kinase. | Switch protein/serine kinase and anti-sigma factor (inhibitory sigma-B binding protein); Negative regulator of sigma-B activity. Phosphorylates and inactivates its specific antagonist protein, RsbV. Upon phosphorylation of RsbV, RsbW is released and binds to sigma-B, thereby blocking its ability to form an RNA polymerase holoenzyme (E-sigma-B). | 0.878 |
rsbT | rsbX | BL02204 | BL02209 | Switch protein/serine-threonine kinase. | Serine phosphatase. | 0.989 |
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