Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Saro_0958 | Saro_0959 | Protein-disulfide isomerase. | Protein of unknown function DUF1159. | 0.885 |
Saro_0958 | Saro_0960 | Protein-disulfide isomerase. | A/G-specific DNA-adenine glycosylase; Adenine glycosylase active on G-A mispairs. | 0.681 |
Saro_0958 | Saro_0962 | Protein-disulfide isomerase. | NUDIX hydrolase. | 0.697 |
Saro_0958 | Saro_0963 | Protein-disulfide isomerase. | DSBA oxidoreductase. | 0.612 |
Saro_0958 | Saro_1005 | Protein-disulfide isomerase. | Protein of unknown function DUF1321. | 0.585 |
Saro_0958 | Saro_1997 | Protein-disulfide isomerase. | UvrD/REP helicase; Belongs to the helicase family. UvrD subfamily. | 0.614 |
Saro_0958 | Saro_1998 | Protein-disulfide isomerase. | Helicase. | 0.612 |
Saro_0958 | Saro_2389 | Protein-disulfide isomerase. | Cobaltochelatase CobT subunit. | 0.590 |
Saro_0958 | Saro_2491 | Protein-disulfide isomerase. | Protein of unknown function DUF448. | 0.587 |
Saro_0958 | Saro_2791 | Protein-disulfide isomerase. | Cytochrome c biogenesis protein, transmembrane region. | 0.674 |
Saro_0959 | Saro_0958 | Protein of unknown function DUF1159. | Protein-disulfide isomerase. | 0.885 |
Saro_0959 | Saro_0960 | Protein of unknown function DUF1159. | A/G-specific DNA-adenine glycosylase; Adenine glycosylase active on G-A mispairs. | 0.697 |
Saro_0959 | Saro_0962 | Protein of unknown function DUF1159. | NUDIX hydrolase. | 0.697 |
Saro_0959 | Saro_0963 | Protein of unknown function DUF1159. | DSBA oxidoreductase. | 0.565 |
Saro_0959 | Saro_1997 | Protein of unknown function DUF1159. | UvrD/REP helicase; Belongs to the helicase family. UvrD subfamily. | 0.559 |
Saro_0959 | Saro_1998 | Protein of unknown function DUF1159. | Helicase. | 0.660 |
Saro_0960 | Saro_0958 | A/G-specific DNA-adenine glycosylase; Adenine glycosylase active on G-A mispairs. | Protein-disulfide isomerase. | 0.681 |
Saro_0960 | Saro_0959 | A/G-specific DNA-adenine glycosylase; Adenine glycosylase active on G-A mispairs. | Protein of unknown function DUF1159. | 0.697 |
Saro_0960 | Saro_0962 | A/G-specific DNA-adenine glycosylase; Adenine glycosylase active on G-A mispairs. | NUDIX hydrolase. | 0.865 |
Saro_0960 | Saro_0963 | A/G-specific DNA-adenine glycosylase; Adenine glycosylase active on G-A mispairs. | DSBA oxidoreductase. | 0.777 |
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