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STRINGSTRING
Saro_1957 protein (Novosphingobium aromaticivorans) - STRING interaction network
"Saro_1957" - annotation not available in Novosphingobium aromaticivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Saro_1957annotation not available (274 aa)    
Predicted Functional Partners:
Saro_3171
annotation not available (258 aa)
   
   
    0.946
Saro_0101
annotation not available (366 aa)
       
  0.907
efp
Elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase (187 aa)
   
        0.902
Saro_0102
annotation not available (249 aa)
       
    0.901
Saro_1552
annotation not available (702 aa)
         
    0.900
Saro_1959
annotation not available (129 aa)
              0.597
Saro_3176
annotation not available (1546 aa)
   
      0.550
Saro_1954
annotation not available (143 aa)
     
      0.503
Saro_1955
annotation not available (184 aa)
         
  0.432
radA
DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3’ invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA’s homology-searching function (455 aa)
              0.426
Your Current Organism:
Novosphingobium aromaticivorans
NCBI taxonomy Id: 279238
Other names: N. aromaticivorans DSM 12444, Novosphingobium aromaticivorans, Novosphingobium aromaticivorans DSM 12444, Novosphingobium aromaticivorans DSM12444, Novosphingobium aromaticivorans str. DSM 12444, Novosphingobium aromaticivorans strain DSM 12444
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