Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Saro_0432 | Saro_1964 | Saro_0432 | Saro_1964 | Pyruvate kinase; Belongs to the pyruvate kinase family. | Fructose-bisphosphate aldolase. | 0.869 |
Saro_0432 | Saro_1967 | Saro_0432 | Saro_1967 | Pyruvate kinase; Belongs to the pyruvate kinase family. | Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 0.888 |
Saro_0432 | Saro_1968 | Saro_0432 | Saro_1968 | Pyruvate kinase; Belongs to the pyruvate kinase family. | Transketolase; Belongs to the transketolase family. | 0.928 |
Saro_0432 | eno | Saro_0432 | Saro_2223 | Pyruvate kinase; Belongs to the pyruvate kinase family. | Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | 0.991 |
Saro_0432 | gpmA | Saro_0432 | Saro_3265 | Pyruvate kinase; Belongs to the pyruvate kinase family. | Phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily. | 0.918 |
Saro_0432 | pgi | Saro_0432 | Saro_1809 | Pyruvate kinase; Belongs to the pyruvate kinase family. | Glucose-6-phosphate isomerase. | 0.980 |
Saro_0432 | pgk | Saro_0432 | Saro_1965 | Pyruvate kinase; Belongs to the pyruvate kinase family. | Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. | 0.893 |
Saro_0432 | tpiA | Saro_0432 | Saro_2019 | Pyruvate kinase; Belongs to the pyruvate kinase family. | Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. | 0.894 |
Saro_0455 | pgk | Saro_0455 | Saro_1965 | Hypothetical protein. | Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. | 0.851 |
Saro_1964 | Saro_0432 | Saro_1964 | Saro_0432 | Fructose-bisphosphate aldolase. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.869 |
Saro_1964 | Saro_1966 | Saro_1964 | Saro_1966 | Fructose-bisphosphate aldolase. | Conserved hypothetical protein. | 0.617 |
Saro_1964 | Saro_1967 | Saro_1964 | Saro_1967 | Fructose-bisphosphate aldolase. | Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 0.982 |
Saro_1964 | Saro_1968 | Saro_1964 | Saro_1968 | Fructose-bisphosphate aldolase. | Transketolase; Belongs to the transketolase family. | 0.961 |
Saro_1964 | eno | Saro_1964 | Saro_2223 | Fructose-bisphosphate aldolase. | Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | 0.905 |
Saro_1964 | gpmA | Saro_1964 | Saro_3265 | Fructose-bisphosphate aldolase. | Phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily. | 0.884 |
Saro_1964 | pgi | Saro_1964 | Saro_1809 | Fructose-bisphosphate aldolase. | Glucose-6-phosphate isomerase. | 0.924 |
Saro_1964 | pgk | Saro_1964 | Saro_1965 | Fructose-bisphosphate aldolase. | Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. | 0.781 |
Saro_1964 | tpiA | Saro_1964 | Saro_2019 | Fructose-bisphosphate aldolase. | Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. | 0.953 |
Saro_1966 | Saro_1964 | Saro_1966 | Saro_1964 | Conserved hypothetical protein. | Fructose-bisphosphate aldolase. | 0.617 |
Saro_1966 | Saro_1967 | Saro_1966 | Saro_1967 | Conserved hypothetical protein. | Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 0.827 |
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