STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Saro_2316Peptidoglycan glycosyltransferase. (844 aa)    
Predicted Functional Partners:
Saro_3329
Penicillin-binding protein 1A.
 
 
0.949
Saro_1942
Serine-type D-Ala-D-Ala carboxypeptidase; Belongs to the peptidase S11 family.
     
 0.940
Saro_2317
N-acetylmuramoyl-L-alanine amidase.
 
   
 0.859
Saro_1127
Peptidoglycan glycosyltransferase.
 
 
0.774
Saro_2131
Peptidoglycan glycosyltransferase.
 
 
0.758
mrdB
Cell elongation-specific peptidoglycan biosynthesis regulator RodA; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily.
  
   
 0.711
Saro_3157
Peptidase M23B.
 
   
 0.704
Saro_0061
Peptidase M23B.
 
   
 0.702
Saro_1132
Cell cycle protein; Belongs to the SEDS family.
  
   
 0.694
Saro_0074
Peptidase M23B.
 
   
 0.682
Your Current Organism:
Novosphingobium aromaticivorans
NCBI taxonomy Id: 279238
Other names: N. aromaticivorans DSM 12444, Novosphingobium aromaticivorans DSM 12444, Novosphingobium aromaticivorans str. DSM 12444, Novosphingobium aromaticivorans strain DSM 12444
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.