Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Saro_0821 | Saro_1340 | AMP-dependent synthetase and ligase. | 3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | 0.906 |
Saro_0821 | Saro_1427 | AMP-dependent synthetase and ligase. | [Acyl-carrier-protein] S-malonyltransferase. | 0.886 |
Saro_0821 | Saro_2768 | AMP-dependent synthetase and ligase. | Alcohol dehydrogenase superfamily, zinc-containing. | 0.523 |
Saro_1340 | Saro_0821 | 3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | AMP-dependent synthetase and ligase. | 0.906 |
Saro_1340 | Saro_1427 | 3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | [Acyl-carrier-protein] S-malonyltransferase. | 0.999 |
Saro_1340 | Saro_2768 | 3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | Alcohol dehydrogenase superfamily, zinc-containing. | 0.904 |
Saro_1427 | Saro_0821 | [Acyl-carrier-protein] S-malonyltransferase. | AMP-dependent synthetase and ligase. | 0.886 |
Saro_1427 | Saro_1340 | [Acyl-carrier-protein] S-malonyltransferase. | 3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | 0.999 |
Saro_1427 | Saro_2768 | [Acyl-carrier-protein] S-malonyltransferase. | Alcohol dehydrogenase superfamily, zinc-containing. | 0.902 |
Saro_2766 | Saro_2767 | Hypothetical protein. | Short-chain dehydrogenase/reductase SDR. | 0.535 |
Saro_2766 | Saro_2768 | Hypothetical protein. | Alcohol dehydrogenase superfamily, zinc-containing. | 0.455 |
Saro_2767 | Saro_2766 | Short-chain dehydrogenase/reductase SDR. | Hypothetical protein. | 0.535 |
Saro_2767 | Saro_2768 | Short-chain dehydrogenase/reductase SDR. | Alcohol dehydrogenase superfamily, zinc-containing. | 0.725 |
Saro_2767 | Saro_2769 | Short-chain dehydrogenase/reductase SDR. | Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | 0.546 |
Saro_2768 | Saro_0821 | Alcohol dehydrogenase superfamily, zinc-containing. | AMP-dependent synthetase and ligase. | 0.523 |
Saro_2768 | Saro_1340 | Alcohol dehydrogenase superfamily, zinc-containing. | 3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | 0.904 |
Saro_2768 | Saro_1427 | Alcohol dehydrogenase superfamily, zinc-containing. | [Acyl-carrier-protein] S-malonyltransferase. | 0.902 |
Saro_2768 | Saro_2766 | Alcohol dehydrogenase superfamily, zinc-containing. | Hypothetical protein. | 0.455 |
Saro_2768 | Saro_2767 | Alcohol dehydrogenase superfamily, zinc-containing. | Short-chain dehydrogenase/reductase SDR. | 0.725 |
Saro_2768 | Saro_2769 | Alcohol dehydrogenase superfamily, zinc-containing. | Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | 0.557 |
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