Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Saro_2837 | Saro_2838 | Saro_2837 | Saro_2838 | Ribosomal large subunit pseudouridine synthase C; Belongs to the pseudouridine synthase RluA family. | Negative transcriptional regulator. | 0.832 |
Saro_2837 | Saro_2839 | Saro_2837 | Saro_2839 | Ribosomal large subunit pseudouridine synthase C; Belongs to the pseudouridine synthase RluA family. | HAD-superfamily hydrolase, subfamily IA, variant 1. | 0.845 |
Saro_2837 | Saro_2840 | Saro_2837 | Saro_2840 | Ribosomal large subunit pseudouridine synthase C; Belongs to the pseudouridine synthase RluA family. | Hypothetical protein. | 0.777 |
Saro_2837 | Saro_2841 | Saro_2837 | Saro_2841 | Ribosomal large subunit pseudouridine synthase C; Belongs to the pseudouridine synthase RluA family. | ATP12 ATPase. | 0.874 |
Saro_2837 | crcB | Saro_2837 | Saro_2836 | Ribosomal large subunit pseudouridine synthase C; Belongs to the pseudouridine synthase RluA family. | Camphor resistance protein CrcB; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family. | 0.851 |
Saro_2837 | rpsU | Saro_2837 | Saro_2835 | Ribosomal large subunit pseudouridine synthase C; Belongs to the pseudouridine synthase RluA family. | SSU ribosomal protein S21P; Belongs to the bacterial ribosomal protein bS21 family. | 0.564 |
Saro_2838 | Saro_2837 | Saro_2838 | Saro_2837 | Negative transcriptional regulator. | Ribosomal large subunit pseudouridine synthase C; Belongs to the pseudouridine synthase RluA family. | 0.832 |
Saro_2838 | Saro_2839 | Saro_2838 | Saro_2839 | Negative transcriptional regulator. | HAD-superfamily hydrolase, subfamily IA, variant 1. | 0.823 |
Saro_2838 | Saro_2840 | Saro_2838 | Saro_2840 | Negative transcriptional regulator. | Hypothetical protein. | 0.762 |
Saro_2838 | Saro_2841 | Saro_2838 | Saro_2841 | Negative transcriptional regulator. | ATP12 ATPase. | 0.823 |
Saro_2838 | crcB | Saro_2838 | Saro_2836 | Negative transcriptional regulator. | Camphor resistance protein CrcB; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family. | 0.832 |
Saro_2838 | rpsU | Saro_2838 | Saro_2835 | Negative transcriptional regulator. | SSU ribosomal protein S21P; Belongs to the bacterial ribosomal protein bS21 family. | 0.503 |
Saro_2839 | Saro_2837 | Saro_2839 | Saro_2837 | HAD-superfamily hydrolase, subfamily IA, variant 1. | Ribosomal large subunit pseudouridine synthase C; Belongs to the pseudouridine synthase RluA family. | 0.845 |
Saro_2839 | Saro_2838 | Saro_2839 | Saro_2838 | HAD-superfamily hydrolase, subfamily IA, variant 1. | Negative transcriptional regulator. | 0.823 |
Saro_2839 | Saro_2840 | Saro_2839 | Saro_2840 | HAD-superfamily hydrolase, subfamily IA, variant 1. | Hypothetical protein. | 0.793 |
Saro_2839 | Saro_2841 | Saro_2839 | Saro_2841 | HAD-superfamily hydrolase, subfamily IA, variant 1. | ATP12 ATPase. | 0.925 |
Saro_2839 | crcB | Saro_2839 | Saro_2836 | HAD-superfamily hydrolase, subfamily IA, variant 1. | Camphor resistance protein CrcB; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family. | 0.840 |
Saro_2839 | rpsU | Saro_2839 | Saro_2835 | HAD-superfamily hydrolase, subfamily IA, variant 1. | SSU ribosomal protein S21P; Belongs to the bacterial ribosomal protein bS21 family. | 0.516 |
Saro_2840 | Saro_2837 | Saro_2840 | Saro_2837 | Hypothetical protein. | Ribosomal large subunit pseudouridine synthase C; Belongs to the pseudouridine synthase RluA family. | 0.777 |
Saro_2840 | Saro_2838 | Saro_2840 | Saro_2838 | Hypothetical protein. | Negative transcriptional regulator. | 0.762 |
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