STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Saro_2914Glycoside hydrolase, family 43; Belongs to the glycosyl hydrolase 43 family. (547 aa)    
Predicted Functional Partners:
Saro_2424
Beta-galactosidase; Belongs to the glycosyl hydrolase 2 family.
 
   
 0.722
Saro_2419
Beta-glucosidase.
 
   
 0.702
Saro_1729
Beta-glucosidase.
 
   
 0.626
Saro_2411
Twin-arginine translocation pathway signal.
 
   
 0.581
Saro_2410
TonB-dependent receptor.
 
     0.574
xylA
D-xylose isomerase; Belongs to the xylose isomerase family.
 
  
 0.548
Saro_1611
Exo-1,4-beta-glucosidase.
 
   
 0.537
Saro_2446
Glycoside hydrolase, family 31; Belongs to the glycosyl hydrolase 31 family.
 
   
 0.506
Saro_1881
TonB-dependent receptor.
  
   
 0.491
Saro_0788
Esterase/lipase-like protein.
 
     0.486
Your Current Organism:
Novosphingobium aromaticivorans
NCBI taxonomy Id: 279238
Other names: N. aromaticivorans DSM 12444, Novosphingobium aromaticivorans DSM 12444, Novosphingobium aromaticivorans str. DSM 12444, Novosphingobium aromaticivorans strain DSM 12444
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