Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Saro_0788 | Saro_2411 | Saro_0788 | Saro_2411 | Esterase/lipase-like protein. | Twin-arginine translocation pathway signal. | 0.645 |
Saro_0788 | Saro_2424 | Saro_0788 | Saro_2424 | Esterase/lipase-like protein. | Beta-galactosidase; Belongs to the glycosyl hydrolase 2 family. | 0.590 |
Saro_0788 | Saro_2914 | Saro_0788 | Saro_2914 | Esterase/lipase-like protein. | Glycoside hydrolase, family 43; Belongs to the glycosyl hydrolase 43 family. | 0.486 |
Saro_1611 | Saro_1729 | Saro_1611 | Saro_1729 | Exo-1,4-beta-glucosidase. | Beta-glucosidase. | 0.929 |
Saro_1611 | Saro_2410 | Saro_1611 | Saro_2410 | Exo-1,4-beta-glucosidase. | TonB-dependent receptor. | 0.483 |
Saro_1611 | Saro_2419 | Saro_1611 | Saro_2419 | Exo-1,4-beta-glucosidase. | Beta-glucosidase. | 0.929 |
Saro_1611 | Saro_2446 | Saro_1611 | Saro_2446 | Exo-1,4-beta-glucosidase. | Glycoside hydrolase, family 31; Belongs to the glycosyl hydrolase 31 family. | 0.410 |
Saro_1611 | Saro_2914 | Saro_1611 | Saro_2914 | Exo-1,4-beta-glucosidase. | Glycoside hydrolase, family 43; Belongs to the glycosyl hydrolase 43 family. | 0.537 |
Saro_1729 | Saro_1611 | Saro_1729 | Saro_1611 | Beta-glucosidase. | Exo-1,4-beta-glucosidase. | 0.929 |
Saro_1729 | Saro_2419 | Saro_1729 | Saro_2419 | Beta-glucosidase. | Beta-glucosidase. | 0.927 |
Saro_1729 | Saro_2424 | Saro_1729 | Saro_2424 | Beta-glucosidase. | Beta-galactosidase; Belongs to the glycosyl hydrolase 2 family. | 0.642 |
Saro_1729 | Saro_2446 | Saro_1729 | Saro_2446 | Beta-glucosidase. | Glycoside hydrolase, family 31; Belongs to the glycosyl hydrolase 31 family. | 0.614 |
Saro_1729 | Saro_2914 | Saro_1729 | Saro_2914 | Beta-glucosidase. | Glycoside hydrolase, family 43; Belongs to the glycosyl hydrolase 43 family. | 0.626 |
Saro_1881 | Saro_2410 | Saro_1881 | Saro_2410 | TonB-dependent receptor. | TonB-dependent receptor. | 0.653 |
Saro_1881 | Saro_2914 | Saro_1881 | Saro_2914 | TonB-dependent receptor. | Glycoside hydrolase, family 43; Belongs to the glycosyl hydrolase 43 family. | 0.491 |
Saro_2410 | Saro_1611 | Saro_2410 | Saro_1611 | TonB-dependent receptor. | Exo-1,4-beta-glucosidase. | 0.483 |
Saro_2410 | Saro_1881 | Saro_2410 | Saro_1881 | TonB-dependent receptor. | TonB-dependent receptor. | 0.653 |
Saro_2410 | Saro_2424 | Saro_2410 | Saro_2424 | TonB-dependent receptor. | Beta-galactosidase; Belongs to the glycosyl hydrolase 2 family. | 0.445 |
Saro_2410 | Saro_2914 | Saro_2410 | Saro_2914 | TonB-dependent receptor. | Glycoside hydrolase, family 43; Belongs to the glycosyl hydrolase 43 family. | 0.574 |
Saro_2411 | Saro_0788 | Saro_2411 | Saro_0788 | Twin-arginine translocation pathway signal. | Esterase/lipase-like protein. | 0.645 |
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