STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Saro_3048Methyl-accepting chemotaxis sensory transducer. (601 aa)    
Predicted Functional Partners:
Saro_2361
Flagellin-like protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
  
 
 0.846
Saro_3047
Carbohydrate-selective porin OprB.
 
     0.813
Saro_3074
RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG; Belongs to the sigma-70 factor family.
 
  
 0.797
Saro_3046
Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.
       0.709
Saro_0036
Histidine kinase.
 
 
 0.669
Saro_1231
Transcriptional regulator, LuxR family.
  
 
 0.617
Saro_1403
Diguanylate cyclase/phosphodiesterase.
 
 
 0.604
Saro_2481
Diguanylate cyclase.
 
 
 0.599
Saro_2627
Multi-sensor hybrid histidine kinase.
  
 
 0.596
Saro_2326
Diguanylate phosphodiesterase.
  
 
 0.573
Your Current Organism:
Novosphingobium aromaticivorans
NCBI taxonomy Id: 279238
Other names: N. aromaticivorans DSM 12444, Novosphingobium aromaticivorans DSM 12444, Novosphingobium aromaticivorans str. DSM 12444, Novosphingobium aromaticivorans strain DSM 12444
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.