STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
flaBFlagellin B; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. (526 aa)    
Predicted Functional Partners:
fliS
Flagellar protein fliS.
 
 
 0.959
CUQ78154.1
Flagellar protein FliS.
  
 
 0.957
fliN
Flagellar motor switch protein FliN.
 
 
 0.938
fliW
Flagellar assembly factor FliW; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum.
 
 
 0.917
flgK_1
Flagellar hook-associated protein 1; Belongs to the flagella basal body rod proteins family.
 
  
 0.916
flgE
Flagellar hook protein flgE.
 
  
 0.915
flgK_2
Flagellar hook-associated protein 1.
 
  
 0.913
fliG
Flagellar motor switch protein FliG.
 
  
 0.912
flgC
Putative proximal rod protein; Belongs to the flagella basal body rod proteins family.
 
  
 0.907
motA
Chemotaxis protein MotA.
 
  
 0.899
Your Current Organism:
Lachnospira pectinoschiza
NCBI taxonomy Id: 28052
Other names: ATCC 49827, L. pectinoschiza, strain 150-1
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