Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| OOV06071.1 | OOV06081.1 | RF819_04445 | RF819_04495 | Photosynthetic reaction center subunit H; Derived by automated computational analysis using gene prediction method: Protein Homology. | Carotenoid 1,2-hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.781 |
| OOV06071.1 | OOV06084.1 | RF819_04445 | RF819_04510 | Photosynthetic reaction center subunit H; Derived by automated computational analysis using gene prediction method: Protein Homology. | Photosynthetic reaction center cytochrome C subunit; The reaction center of purple bacteria contains a tightly bound cytochrome molecule which re-reduces the photo oxidized primary electron donor. | 0.994 |
| OOV06071.1 | OOV06085.1 | RF819_04445 | RF819_04515 | Photosynthetic reaction center subunit H; Derived by automated computational analysis using gene prediction method: Protein Homology. | Photosynthetic reaction center subunit M; The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis. | 0.998 |
| OOV06071.1 | OOV06086.1 | RF819_04445 | RF819_04520 | Photosynthetic reaction center subunit H; Derived by automated computational analysis using gene prediction method: Protein Homology. | Photosynthetic reaction center subunit L; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the reaction center PufL/M/PsbA/D family. | 0.998 |
| OOV06071.1 | OOV06088.1 | RF819_04445 | RF819_04535 | Photosynthetic reaction center subunit H; Derived by automated computational analysis using gene prediction method: Protein Homology. | Light-harvesting protein; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers. | 0.991 |
| OOV06071.1 | OOV06089.1 | RF819_04445 | RF819_04540 | Photosynthetic reaction center subunit H; Derived by automated computational analysis using gene prediction method: Protein Homology. | Chlorophyllide a reductase subunit Z; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.854 |
| OOV06071.1 | OOV06091.1 | RF819_04445 | RF819_04550 | Photosynthetic reaction center subunit H; Derived by automated computational analysis using gene prediction method: Protein Homology. | Chlorophyllide a reductase iron protein subunit X; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NifH/BchL/ChlL family. | 0.892 |
| OOV06071.1 | OOV08891.1 | RF819_04445 | RF819_04525 | Photosynthetic reaction center subunit H; Derived by automated computational analysis using gene prediction method: Protein Homology. | Light-harvesting protein; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers. | 0.991 |
| OOV06081.1 | OOV06071.1 | RF819_04495 | RF819_04445 | Carotenoid 1,2-hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Photosynthetic reaction center subunit H; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.781 |
| OOV06081.1 | OOV06084.1 | RF819_04495 | RF819_04510 | Carotenoid 1,2-hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Photosynthetic reaction center cytochrome C subunit; The reaction center of purple bacteria contains a tightly bound cytochrome molecule which re-reduces the photo oxidized primary electron donor. | 0.911 |
| OOV06081.1 | OOV06085.1 | RF819_04495 | RF819_04515 | Carotenoid 1,2-hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Photosynthetic reaction center subunit M; The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis. | 0.900 |
| OOV06081.1 | OOV06086.1 | RF819_04495 | RF819_04520 | Carotenoid 1,2-hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Photosynthetic reaction center subunit L; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the reaction center PufL/M/PsbA/D family. | 0.908 |
| OOV06081.1 | OOV06088.1 | RF819_04495 | RF819_04535 | Carotenoid 1,2-hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Light-harvesting protein; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers. | 0.866 |
| OOV06081.1 | OOV06089.1 | RF819_04495 | RF819_04540 | Carotenoid 1,2-hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Chlorophyllide a reductase subunit Z; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.855 |
| OOV06081.1 | OOV06091.1 | RF819_04495 | RF819_04550 | Carotenoid 1,2-hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Chlorophyllide a reductase iron protein subunit X; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NifH/BchL/ChlL family. | 0.832 |
| OOV06081.1 | OOV08891.1 | RF819_04495 | RF819_04525 | Carotenoid 1,2-hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Light-harvesting protein; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers. | 0.873 |
| OOV06084.1 | OOV06071.1 | RF819_04510 | RF819_04445 | Photosynthetic reaction center cytochrome C subunit; The reaction center of purple bacteria contains a tightly bound cytochrome molecule which re-reduces the photo oxidized primary electron donor. | Photosynthetic reaction center subunit H; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.994 |
| OOV06084.1 | OOV06081.1 | RF819_04510 | RF819_04495 | Photosynthetic reaction center cytochrome C subunit; The reaction center of purple bacteria contains a tightly bound cytochrome molecule which re-reduces the photo oxidized primary electron donor. | Carotenoid 1,2-hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.911 |
| OOV06084.1 | OOV06085.1 | RF819_04510 | RF819_04515 | Photosynthetic reaction center cytochrome C subunit; The reaction center of purple bacteria contains a tightly bound cytochrome molecule which re-reduces the photo oxidized primary electron donor. | Photosynthetic reaction center subunit M; The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis. | 0.991 |
| OOV06084.1 | OOV06086.1 | RF819_04510 | RF819_04520 | Photosynthetic reaction center cytochrome C subunit; The reaction center of purple bacteria contains a tightly bound cytochrome molecule which re-reduces the photo oxidized primary electron donor. | Photosynthetic reaction center subunit L; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the reaction center PufL/M/PsbA/D family. | 0.999 |
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