STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yadHTransporter subunit: membrane component of ABC superfamily protein. (257 aa)    
Predicted Functional Partners:
yadG
Transporter subunit: ATP-binding component of ABC superfamily protein.
 
 0.992
ybhF
ABC transporter ATP-binding protein.
  
 
 0.710
ftsE
Cell division ATP transporter FtsE; Part of the ABC transporter FtsEX involved in cellular division.
  
 
 0.621
wzm
ABC transporter of LPS O-antigen, Wzm.
    
  0.563
Lcin_2532
Nitroreductase.
  
    0.555
Lcin_2643
Hypothetical protein.
  
    0.555
drgA
Nitroreductase.
  
    0.555
ugpA
Sn-glycerol-3-phosphate transport system permease protein UgpA.
     
 0.552
tycC_2
Non-ribosomal peptide synthase.
     
 0.543
ugpE
Sn-glycerol-3-phosphate transport system permease protein UgpE; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane.
     
 0.514
Your Current Organism:
Legionella cincinnatiensis
NCBI taxonomy Id: 28085
Other names: ATCC 43753, CCUG 31230 A, CIP 103875, DSM 19233, L. cincinnatiensis, NCTC 12438, strain 72-OH-H
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.