node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Lxx14630 | mraW | Lxx14630 | Lxx15340 | Conserved hypothetical protein; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | S-adenosyl-methyltransferase; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA. | 0.501 |
Lxx14630 | rsmI | Lxx14630 | Lxx17580 | Conserved hypothetical protein; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | Tetrapyrrole methylase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA. | 0.403 |
Lxx17570 | rsmI | Lxx17570 | Lxx17580 | Integral membrane protein; Identified by sequence similarity. | Tetrapyrrole methylase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA. | 0.611 |
greA | pheT | Lxx16890 | Lxx05990 | Transcription elongation factor; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides. | phenylalanyl-tRNA synthetase, beta subunit; Identified by sequence similarity; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.497 |
greA | rsmI | Lxx16890 | Lxx17580 | Transcription elongation factor; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides. | Tetrapyrrole methylase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA. | 0.525 |
ksgA | pheT | Lxx17490 | Lxx05990 | Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. | phenylalanyl-tRNA synthetase, beta subunit; Identified by sequence similarity; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.667 |
ksgA | rsmI | Lxx17490 | Lxx17580 | Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. | Tetrapyrrole methylase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA. | 0.421 |
ksgA | trmD | Lxx17490 | Lxx14850 | Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. | tRNA-(guanine-N1)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family. | 0.402 |
mraW | Lxx14630 | Lxx15340 | Lxx14630 | S-adenosyl-methyltransferase; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA. | Conserved hypothetical protein; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | 0.501 |
mraW | pheT | Lxx15340 | Lxx05990 | S-adenosyl-methyltransferase; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA. | phenylalanyl-tRNA synthetase, beta subunit; Identified by sequence similarity; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.580 |
mraW | rsmI | Lxx15340 | Lxx17580 | S-adenosyl-methyltransferase; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA. | Tetrapyrrole methylase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA. | 0.775 |
panB | rsmI | Lxx10000 | Lxx17580 | 3-methyl-2-oxobutanoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family. | Tetrapyrrole methylase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA. | 0.622 |
pheT | greA | Lxx05990 | Lxx16890 | phenylalanyl-tRNA synthetase, beta subunit; Identified by sequence similarity; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | Transcription elongation factor; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides. | 0.497 |
pheT | ksgA | Lxx05990 | Lxx17490 | phenylalanyl-tRNA synthetase, beta subunit; Identified by sequence similarity; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. | 0.667 |
pheT | mraW | Lxx05990 | Lxx15340 | phenylalanyl-tRNA synthetase, beta subunit; Identified by sequence similarity; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | S-adenosyl-methyltransferase; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA. | 0.580 |
pheT | rsmI | Lxx05990 | Lxx17580 | phenylalanyl-tRNA synthetase, beta subunit; Identified by sequence similarity; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | Tetrapyrrole methylase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA. | 0.449 |
pheT | trmD | Lxx05990 | Lxx14850 | phenylalanyl-tRNA synthetase, beta subunit; Identified by sequence similarity; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | tRNA-(guanine-N1)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family. | 0.690 |
rsmI | Lxx14630 | Lxx17580 | Lxx14630 | Tetrapyrrole methylase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA. | Conserved hypothetical protein; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | 0.403 |
rsmI | Lxx17570 | Lxx17580 | Lxx17570 | Tetrapyrrole methylase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA. | Integral membrane protein; Identified by sequence similarity. | 0.611 |
rsmI | greA | Lxx17580 | Lxx16890 | Tetrapyrrole methylase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA. | Transcription elongation factor; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides. | 0.525 |