Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| OEJ64110.1 | OEJ65599.1 | BEN30_01555 | BEN30_14145 | Hypothetical protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | DNA polymerase III subunit chi; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.631 |
| OEJ64110.1 | OEJ67831.1 | BEN30_01555 | BEN30_08045 | Hypothetical protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.710 |
| OEJ64110.1 | OEJ69325.1 | BEN30_01555 | BEN30_04415 | Hypothetical protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Double-strand break repair protein AddB; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.779 |
| OEJ64110.1 | OEJ69326.1 | BEN30_01555 | BEN30_04420 | Hypothetical protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Double-strand break repair helicase AddA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the helicase family. UvrD subfamily. | 0.718 |
| OEJ64110.1 | lptD | BEN30_01555 | BEN30_06300 | Hypothetical protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Hypothetical protein; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family. | 0.711 |
| OEJ64110.1 | recO | BEN30_01555 | BEN30_03205 | Hypothetical protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination. | 0.403 |
| OEJ65265.1 | OEJ69326.1 | BEN30_15040 | BEN30_04420 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Double-strand break repair helicase AddA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the helicase family. UvrD subfamily. | 0.931 |
| OEJ65599.1 | OEJ64110.1 | BEN30_14145 | BEN30_01555 | DNA polymerase III subunit chi; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.631 |
| OEJ65599.1 | OEJ67831.1 | BEN30_14145 | BEN30_08045 | DNA polymerase III subunit chi; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.681 |
| OEJ65599.1 | OEJ69325.1 | BEN30_14145 | BEN30_04415 | DNA polymerase III subunit chi; Derived by automated computational analysis using gene prediction method: Protein Homology. | Double-strand break repair protein AddB; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.722 |
| OEJ65599.1 | OEJ69326.1 | BEN30_14145 | BEN30_04420 | DNA polymerase III subunit chi; Derived by automated computational analysis using gene prediction method: Protein Homology. | Double-strand break repair helicase AddA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the helicase family. UvrD subfamily. | 0.747 |
| OEJ65599.1 | lptD | BEN30_14145 | BEN30_06300 | DNA polymerase III subunit chi; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family. | 0.703 |
| OEJ65599.1 | recO | BEN30_14145 | BEN30_03205 | DNA polymerase III subunit chi; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination. | 0.709 |
| OEJ67831.1 | OEJ64110.1 | BEN30_08045 | BEN30_01555 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.710 |
| OEJ67831.1 | OEJ65599.1 | BEN30_08045 | BEN30_14145 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase III subunit chi; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.681 |
| OEJ67831.1 | OEJ69325.1 | BEN30_08045 | BEN30_04415 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Double-strand break repair protein AddB; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.736 |
| OEJ67831.1 | OEJ69326.1 | BEN30_08045 | BEN30_04420 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Double-strand break repair helicase AddA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the helicase family. UvrD subfamily. | 0.712 |
| OEJ67831.1 | recO | BEN30_08045 | BEN30_03205 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination. | 0.688 |
| OEJ69323.1 | OEJ69324.1 | BEN30_04405 | BEN30_04410 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Mannose-1-phosphate guanylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
| OEJ69323.1 | OEJ69325.1 | BEN30_04405 | BEN30_04415 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Double-strand break repair protein AddB; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.874 |
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