STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NIG5292_01253Unannotated protein. (150 aa)    
Predicted Functional Partners:
flgB
Unannotated protein; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
  
 
 0.989
fliE
Unannotated protein.
  
 
 0.979
NIG5292_02185
Unannotated protein.
  
  
 0.950
NIG5292_02632
Unannotated protein.
 
  
 0.948
flgE
Unannotated protein.
  
 
 0.943
flgC
Unannotated protein; Belongs to the flagella basal body rod proteins family.
  
 
 0.931
flgG_2
Unannotated protein; Belongs to the flagella basal body rod proteins family.
  
 
 0.929
flgI
Unannotated protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
  
 
 0.926
flgH
Unannotated protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
  
 
 0.926
fliQ
Unannotated protein; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family.
  
 
 0.925
Your Current Organism:
Nereida ignava
NCBI taxonomy Id: 282199
Other names: CCUG 49433, CECT 5292, CIP 108404, DSM 16309, N. ignava, Nereida ignava Pujalte et al. 2005, strain 2SM4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.