A0A267DEN8 protein (Macrostomum lignano) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A267DEN8

Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. (757 aa)

Predicted Functional Partners:

A0A267E8A3

0.810

A0A267FM03

0.810

A0A267G489

0.810

A0A267DWX5

0.766

A0A267FSB4

0.743

A0A267FVU8

0.743

A0A267G7Y9

0.743

A0A1I8IIU4

0.701

A0A267G4T8

0.701

A0A1I8HUJ1

0.698

Your Current Organism:

Macrostomum lignano

NCBI taxonomy Id: 282301
Other names: M. lignano

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1I8HUJ1	A0A1I8IIU4	Uncharacterized protein.	Guanylate kinase-like domain-containing protein.	0.871
A0A1I8HUJ1	A0A267DEN8	Uncharacterized protein.	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.	0.698
A0A1I8HUJ1	A0A267E8A3	Uncharacterized protein.	Uncharacterized protein.	0.997
A0A1I8HUJ1	A0A267FM03	Uncharacterized protein.	Uncharacterized protein.	0.997
A0A1I8HUJ1	A0A267G489	Uncharacterized protein.	Uncharacterized protein.	0.997
A0A1I8HUJ1	A0A267G4T8	Uncharacterized protein.	Guanylate kinase-like domain-containing protein.	0.871
A0A1I8IIU4	A0A1I8HUJ1	Guanylate kinase-like domain-containing protein.	Uncharacterized protein.	0.871
A0A1I8IIU4	A0A267DEN8	Guanylate kinase-like domain-containing protein.	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.	0.701
A0A1I8IIU4	A0A267DWX5	Guanylate kinase-like domain-containing protein.	Uncharacterized protein.	0.486
A0A1I8IIU4	A0A267E8A3	Guanylate kinase-like domain-containing protein.	Uncharacterized protein.	0.989
A0A1I8IIU4	A0A267FM03	Guanylate kinase-like domain-containing protein.	Uncharacterized protein.	0.989
A0A1I8IIU4	A0A267G489	Guanylate kinase-like domain-containing protein.	Uncharacterized protein.	0.989
A0A1I8IIU4	A0A267G4T8	Guanylate kinase-like domain-containing protein.	Guanylate kinase-like domain-containing protein.	0.761
A0A267DEN8	A0A1I8HUJ1	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.	Uncharacterized protein.	0.698
A0A267DEN8	A0A1I8IIU4	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.	Guanylate kinase-like domain-containing protein.	0.701
A0A267DEN8	A0A267DWX5	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.	Uncharacterized protein.	0.766
A0A267DEN8	A0A267E8A3	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.	Uncharacterized protein.	0.810
A0A267DEN8	A0A267FM03	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.	Uncharacterized protein.	0.810
A0A267DEN8	A0A267FSB4	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.	Uncharacterized protein.	0.743
A0A267DEN8	A0A267FVU8	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.	Uncharacterized protein.	0.743