STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100558440ABC transmembrane type-1 domain-containing protein. (444 aa)    
Predicted Functional Partners:
tap2
Uncharacterized protein.
  
0.929
CALR
Calreticulin.
   
 0.926
LOC100557361
Calreticulin.
   
 0.926
LOC103282913
Uncharacterized protein.
   
 0.920
G1KYC1_ANOCA
Uncharacterized protein.
 
 
0.844
PSMB8
Proteasome subunit beta.
 
 
 0.604
PDIA3
Protein disulfide-isomerase.
   
 0.595
ABCB9
ATP binding cassette subfamily B member 9.
  
  
 
0.558
LOC100554917
ABC transmembrane type-1 domain-containing protein.
  
  
 
0.543
KATNAL2
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
  
 0.497
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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