STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANKRD16Ankyrin repeat domain 16. (371 aa)    
Predicted Functional Partners:
NSMCE4A
Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids.
    
 
 0.502
TMEM14C
Transmembrane protein 14C.
      
 0.459
ASB11
Ankyrin repeat and SOCS box containing 11.
  
     0.454
ANKRD22
Ankyrin repeat domain 22.
  
     0.441
CCDC12
Coiled-coil domain containing 12.
   
  
 0.435
CDKN2C
Cyclin dependent kinase inhibitor 2C.
  
     0.435
PPP1R27
Protein phosphatase 1 regulatory subunit 27.
  
  
  0.435
LOC100562668
ANK_REP_REGION domain-containing protein.
  
     0.435
FBH1
F-box DNA helicase 1.
      
 0.432
KLHL30
Kelch like family member 30.
   
  0.430
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.