STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RELREL proto-oncogene, NF-kB subunit. (581 aa)    
Predicted Functional Partners:
nfkbia
ANK_REP_REGION domain-containing protein.
   
 0.882
NFKB2
Nuclear factor kappa B subunit 2.
   
0.833
NFKBIB
NFKB inhibitor beta.
   
 0.775
CREBBP
CREB binding protein.
    
 0.731
BCL3
BCL3 transcription coactivator.
   
 0.713
ANKRD6
Ankyrin repeat domain 6.
   
 0.713
EP300
E1A binding protein p300.
    
 0.705
IKBKB
Inhibitor of nuclear factor kappa B kinase subunit beta.
    
 0.703
CHUK
Component of inhibitor of nuclear factor kappa B kinase complex.
    
 0.690
setd6
SET domain-containing protein.
    
 0.628
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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