RBPMS protein (Anolis carolinensis) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

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[Homology]

Score

RBPMS

RNA binding protein, mRNA processing factor. (196 aa)

Predicted Functional Partners:

QKI

0.819

RBFOX2

0.667

ESRP1

0.547

RBFOX1

0.527

DIP2C

0.520

RBPMS2

0.492

ESRP2

0.481

SMU1

0.478

IK

0.478

LOC100563157

0.452

Your Current Organism:

Anolis carolinensis

NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DIP2C	RBPMS	ENSACAP00000002742	ENSACAP00000002958	Disco interacting protein 2 homolog C.	RNA binding protein, mRNA processing factor.	0.520
ESRP1	ESRP2	ENSACAP00000003674	ENSACAP00000009746	Epithelial splicing regulatory protein 1.	Epithelial splicing regulatory protein 2.	0.507
ESRP1	QKI	ENSACAP00000003674	ENSACAP00000003200	Epithelial splicing regulatory protein 1.	QKI, KH domain containing RNA binding.	0.475
ESRP1	RBPMS	ENSACAP00000003674	ENSACAP00000002958	Epithelial splicing regulatory protein 1.	RNA binding protein, mRNA processing factor.	0.547
ESRP2	ESRP1	ENSACAP00000009746	ENSACAP00000003674	Epithelial splicing regulatory protein 2.	Epithelial splicing regulatory protein 1.	0.507
ESRP2	RBPMS	ENSACAP00000009746	ENSACAP00000002958	Epithelial splicing regulatory protein 2.	RNA binding protein, mRNA processing factor.	0.481
IK	RBPMS	ENSACAP00000012716	ENSACAP00000002958	IK cytokine.	RNA binding protein, mRNA processing factor.	0.478
IK	SMU1	ENSACAP00000012716	ENSACAP00000003395	IK cytokine.	SMU1 DNA replication regulator and spliceosomal factor.	0.998
LOC100563157	QKI	ENSACAP00000020876	ENSACAP00000003200	RNA binding protein fox-1 homolog; RNA-binding protein that regulates alternative splicing events.	QKI, KH domain containing RNA binding.	0.549
LOC100563157	RBPMS	ENSACAP00000020876	ENSACAP00000002958	RNA binding protein fox-1 homolog; RNA-binding protein that regulates alternative splicing events.	RNA binding protein, mRNA processing factor.	0.452
QKI	ESRP1	ENSACAP00000003200	ENSACAP00000003674	QKI, KH domain containing RNA binding.	Epithelial splicing regulatory protein 1.	0.475
QKI	LOC100563157	ENSACAP00000003200	ENSACAP00000020876	QKI, KH domain containing RNA binding.	RNA binding protein fox-1 homolog; RNA-binding protein that regulates alternative splicing events.	0.549
QKI	RBFOX1	ENSACAP00000003200	ENSACAP00000004055	QKI, KH domain containing RNA binding.	RNA binding protein fox-1 homolog 1; RNA-binding protein that regulates alternative splicing events.	0.549
QKI	RBFOX2	ENSACAP00000003200	ENSACAP00000016297	QKI, KH domain containing RNA binding.	RNA binding protein fox-1 homolog 2; RNA-binding protein that regulates alternative splicing events.	0.719
QKI	RBPMS	ENSACAP00000003200	ENSACAP00000002958	QKI, KH domain containing RNA binding.	RNA binding protein, mRNA processing factor.	0.819
RBFOX1	QKI	ENSACAP00000004055	ENSACAP00000003200	RNA binding protein fox-1 homolog 1; RNA-binding protein that regulates alternative splicing events.	QKI, KH domain containing RNA binding.	0.549
RBFOX1	RBPMS	ENSACAP00000004055	ENSACAP00000002958	RNA binding protein fox-1 homolog 1; RNA-binding protein that regulates alternative splicing events.	RNA binding protein, mRNA processing factor.	0.527
RBFOX2	QKI	ENSACAP00000016297	ENSACAP00000003200	RNA binding protein fox-1 homolog 2; RNA-binding protein that regulates alternative splicing events.	QKI, KH domain containing RNA binding.	0.719
RBFOX2	RBPMS	ENSACAP00000016297	ENSACAP00000002958	RNA binding protein fox-1 homolog 2; RNA-binding protein that regulates alternative splicing events.	RNA binding protein, mRNA processing factor.	0.667
RBFOX2	RBPMS2	ENSACAP00000016297	ENSACAP00000011983	RNA binding protein fox-1 homolog 2; RNA-binding protein that regulates alternative splicing events.	RNA binding protein, mRNA processing factor 2.	0.480