STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLU7SLU7 homolog, splicing factor. (587 aa)    
Predicted Functional Partners:
prpf18
SFM domain-containing protein.
  
 0.998
SNRNP200
Small nuclear ribonucleoprotein U5 subunit 200.
    
 
 0.997
CRNKL1
Crooked neck pre-mRNA splicing factor 1.
   
 
 0.997
BUD31
BUD31 homolog.
    
 
 0.996
CDC5L
Cell division cycle 5 like.
   
 
 0.996
PRPF8
Pre-mRNA processing factor 8.
    
 
 0.996
CWC22
CWC22 spliceosome associated protein homolog.
   
 0.995
PRPF19
Pre-mRNA processing factor 19.
    
 
 0.994
DHX38
DEAH-box helicase 38.
   
 0.993
PRPF3
Pre-mRNA processing factor 3.
   
 
 0.975
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.