STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BRD3Bromodomain containing 3. (756 aa)    
Predicted Functional Partners:
TAF7
TATA-box binding protein associated factor 7.
    
 
 0.727
DMAP1
DNA methyltransferase 1 associated protein 1.
    
 
 0.588
NSD3
Nuclear receptor binding SET domain protein 3.
   
 
 0.545
JMJD6
Jumonji domain containing 6, arginine demethylase and lysine hydroxylase.
    
 
 0.542
E2F1
E2F transcription factor 1.
    
 
 0.542
CDK9
Cyclin dependent kinase 9.
   
 
 0.539
taf1
Transcription initiation factor TFIID subunit.
    
 
0.539
EP300
E1A binding protein p300.
   
0.477
YEATS4
YEATS domain containing 4.
    
 
 0.468
CRBN
Cereblon.
    
 
 0.459
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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