Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ADAM19 | SH3PXD2A | ENSACAP00000003391 | ENSACAP00000004823 | ADAM metallopeptidase domain 19. | SH3 and PX domains 2A. | 0.644 |
ADAM19 | SOX30 | ENSACAP00000003391 | ENSACAP00000003276 | ADAM metallopeptidase domain 19. | SRY-box transcription factor 30. | 0.659 |
ADAM19 | THG1L | ENSACAP00000003391 | ENSACAP00000003247 | ADAM metallopeptidase domain 19. | tRNA(His) guanylyltransferase; Adds a GMP to the 5'-end of tRNA(His) after transcription and RNase P cleavage. | 0.766 |
SH3PXD2A | ADAM19 | ENSACAP00000004823 | ENSACAP00000003391 | SH3 and PX domains 2A. | ADAM metallopeptidase domain 19. | 0.644 |
SOX30 | ADAM19 | ENSACAP00000003276 | ENSACAP00000003391 | SRY-box transcription factor 30. | ADAM metallopeptidase domain 19. | 0.659 |
SOX30 | THG1L | ENSACAP00000003276 | ENSACAP00000003247 | SRY-box transcription factor 30. | tRNA(His) guanylyltransferase; Adds a GMP to the 5'-end of tRNA(His) after transcription and RNase P cleavage. | 0.756 |
THG1L | ADAM19 | ENSACAP00000003247 | ENSACAP00000003391 | tRNA(His) guanylyltransferase; Adds a GMP to the 5'-end of tRNA(His) after transcription and RNase P cleavage. | ADAM metallopeptidase domain 19. | 0.766 |
THG1L | SOX30 | ENSACAP00000003247 | ENSACAP00000003276 | tRNA(His) guanylyltransferase; Adds a GMP to the 5'-end of tRNA(His) after transcription and RNase P cleavage. | SRY-box transcription factor 30. | 0.756 |