STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hmga2Uncharacterized protein. (72 aa)    
Predicted Functional Partners:
SUOX
Sulfite oxidase.
      
 0.688
HMGA1
High mobility group AT-hook 1.
   
 
 0.652
LIN28B
Lin-28 homolog B.
      
 0.560
IGF2BP2
Insulin like growth factor 2 mRNA binding protein 2.
   
 
 0.520
LCORL
Ligand dependent nuclear receptor corepressor like.
      
 0.484
Lcorl
Uncharacterized protein.
      
 0.484
LOC103282543
Uncharacterized protein.
    
 0.475
PLAG1
PLAG1 zinc finger.
      
 0.459
RAD51B
RAD51 paralog B.
      
 0.436
NCAPG
Non-SMC condensin I complex subunit G.
      
 0.433
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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