STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOXLysyl oxidase. (414 aa)    
Predicted Functional Partners:
H9GVY0_ANOCA
Uncharacterized protein.
 
   
  0.752
TRPV1
Transient receptor potential cation channel subfamily V member 1.
      
 0.688
ssc4d
Uncharacterized protein.
 
  
  0.496
H9G5H3_ANOCA
Uncharacterized protein.
    
 0.494
FBLN5
Fibulin 5.
   
 
 0.482
LPCAT3
Lysophosphatidylcholine acyltransferase 3; Belongs to the membrane-bound acyltransferase family.
      
 0.447
ACSL4
Acyl-CoA synthetase long chain family member 4.
    
 0.429
MRTFB
Myocardin related transcription factor B.
    
 0.414
SCO1
SCO cytochrome c oxidase assembly protein 1.
      
 0.414
H9GUF2_ANOCA
Uncharacterized protein.
      
 0.414
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.